Structural Research of Chain Length Determinant and Associated Proteins
Lipopolysaccharides (LPSs) represent an indubitable and fundamental component of the outer membrane of Gram-negative bacteria, playing a multifaceted and intricate role in an assortment of biological processes, ranging from cell recognition, host-pathogen interactions, and virulence. The structure of LPSs is determined by a series of enzymes, including the chain-length determinant proteins, which are responsible for controlling the length of the O-antigen polysaccharide chain. Without these proteins, the LPS synthesis process would be impaired and potentially catastrophic.
The Wzy-dependent pathway of polysaccharide biosynthesis, which is implicated in the synthesis of these LPSs, is an extraordinarily important and intricate process that warrants closer examination and exploration. Recent advances in the field of single-particle cryo-electron microscopy have enabled the elucidation and resolution of the structure of WzzB, which is one of the co-polymerase components of this pathway. The structure of WzzB, resembling a box jellyfish, consists of an octameric assembly, including a large bell-shaped periplasmic domain. The 2-helix transmembrane domain of each protomer serves to encircle and embrace a vast and seemingly empty transmembrane chamber, which further underscores the complexity and intricacy of this process. Through this structure, the intricate and elaborate architecture of the transmembrane domain is also revealed, including the location of critical and essential residues that are pertinent and central to the Wzz-family of proteins.
Figure 1. The overall structure of WzzB. (Wiseman B, et al., 2021)
Protein | Organism | Method | Resolution | PDB Entry ID |
Oligomeric Wzz protein (expressed in E. coli) | Staphylococcus aureus | Cryo-EM single particle analysis | 9.00 Å | 5NBZ |
WzzB co-polymerase component of the Wzy-dependent pathway (expressed in E. coli) | Escherichia coli | Cryo-EM single particle analysis | 3.00 Å | 6RBG |
Wzc capsule assembly protein, K540M C1 (expressed in E. coli) | Escherichia coli | Cryo-EM single particle analysis | 2.85 Å | 7NHR |
Table 1. Structural research of chain-length determinant protein involved in lipopolysaccharide synthesis.
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References
- Collins R F, et al. Full-length, oligomeric structure of Wzz determined by cryoelectron microscopy reveals insights into membrane-bound states. Structure. 2017, 25(5): 806-815. e3.
- Wiseman B, et al. Structure of a full-length bacterial polysaccharide co-polymerase. Nature Communications. 2021, 12(1): 369.
- Yang Y, et al. The molecular basis of regulation of bacterial capsule assembly by Wzc. Nature Communications. 2021, 12(1): 4349.